Entry Detail



General Information

Database ID:exR0017335
RNA Name:ADAP1
RNA Type:mRNA
Chromosome:chr7
Starnd:-
Coordinate:
Start Site(bp):897900End Site(bp):955407
External Links:ENSG00000105963



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
COX19
chr7
898778
975549
-
CYC1
chr8
144095039
144097525
+
ERC1
chr12
990509
1495933
+
HNRNPD
chr4
82352498
82374503
-
ITGAV
chr2
186590056
186680901
+
JMJD8
chr16
681670
684528
-
KDM4B
chr19
4969113
5153598
+
MCRIP2
chr16
636817
648474
+
NUP93
chr16
56730118
56850286
+
PHLDA1
chr12
76025447
76033932
-
RAC1
chr7
6374527
6403967
+
RPS20
chr8
56067295
56074581
-
TIMM9
chr14
58408495
58427531
-
TMEM165
chr4
55395957
55453397
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA