Entry Detail



General Information

Database ID:exR0017352
RNA Name:ADCY6
RNA Type:mRNA
Chromosome:chr12
Starnd:-
Coordinate:
Start Site(bp):48766194End Site(bp):48789037
External Links:ENSG00000174233



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
MACF1
chr1
39081316
39487177
+
SLC25A29
chr14
100291116
100306547
-
HSP90AB1
chr6
44246166
44253888
+
CALM1
chr14
90396502
90408268
+
PRRT4
chr7
128350325
128361685
-
LCMT1
chr16
25111731
25178231
+
FLNA
chrX
154348524
154374638
-
TPM4
chr19
16067021
16103002
+
FADS2
chr11
61792980
61867354
+
MYBBP1A
chr17
4538897
4555631
-
UBB
chr17
16380798
16382745
+
RNF167
chr17
4940008
4945222
+
PUS1
chr12
131929200
131945896
+
LRCH4
chr7
100574011
100586129
-
SELENOP
chr5
42799880
42887392
-
ARID1A
chr1
26693236
26782104
+
PEX19
chr1
160276812
160286348
-
IGF2
chr11
2129112
2141238
-
FNDC3B
chr3
172039578
172401669
+
HUWE1
chrX
53532096
53686728
-
PDCD7
chr15
65117379
65133808
-
LENG8
chr19
54448887
54462037
+
SYNM
chr15
99098217
99135593
+
EME2
chr16
1772810
1781708
+
FNTB
chr14
64986895
65062652
+
SMARCD1
chr12
50085200
50100707
+
SNTB2
chr16
69187129
69309052
+
ZNF628
chr19
55476617
55484487
+
SNRPF
chr12
95858928
95903828
+
TAZ
chrX
154411524
154421726
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC069281.2
chr7
100572232
100578700
-
AC138761.1
chr17
22266395
22288301
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA