Entry Detail



General Information

Database ID:exR0017379
RNA Name:ADM5
RNA Type:mRNA
Chromosome:chr19
Starnd:+
Coordinate:
Start Site(bp):49688664End Site(bp):49690575
External Links:ENSG00000224420



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AOC2
chr17
42844580
42850707
+
ATP5F1D
chr19
1241746
1244825
+
B4GALNT1
chr12
57623409
57633239
-
DCXR
chr17
82035136
82037709
-
ELF4
chrX
130064874
130110716
-
GBE1
chr3
81489703
81761645
-
LMO2
chr11
33858576
33892076
-
MIXL1
chr1
226223618
226227054
+
MLXIP
chr12
122078756
122147344
+
NCAPG2
chr7
158631169
158704804
-
PRMT1
chr19
49675786
49689029
+
RPL27
chr17
42998273
43002959
+
RPL4
chr15
66498015
66524532
-
TM9SF4
chr20
32109714
32167258
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
FBXL19-AS1
chr16
30919319
30923269
-
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA