Entry Detail



General Information

Database ID:exR0017397
RNA Name:ADRA2C
RNA Type:mRNA
Chromosome:chr4
Starnd:+
Coordinate:
Start Site(bp):3766348End Site(bp):3768526
External Links:ENSG00000184160



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC010422.3
chr19
12643831
12648397
-
AC093525.1
chr16
2513965
2527955
+
AGPS
chr2
177392757
177559299
+
ATP6V0C
chr16
2513952
2520218
+
BRCA1
chr17
43044295
43170245
-
EEF2
chr19
3976056
3985463
-
EIF1
chr17
41688885
41692668
+
EMID1
chr22
29205896
29259597
+
MAGED1
chrX
51803007
51902357
+
MARK2
chr11
63838928
63911019
+
MFGE8
chr15
88898683
88913381
-
NAP1L1
chr12
76036585
76084958
-
PCBP1
chr2
70087477
70089203
+
PKM
chr15
72199029
72231822
-
POLR3D
chr8
22245133
22254601
+
PRKD1
chr14
29576479
30191898
-
PSIP1
chr9
15464066
15510995
-
PTMA
chr2
231706895
231713541
+
RACK1
chr5
181236897
181248096
-
RPL8
chr8
144789765
144792587
-
SAMD11
chr1
923928
944581
+
SH3BP4
chr2
234952017
235055714
+
SNRPB
chr20
2461634
2470853
-
USO1
chr4
75724593
75814286
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC060780.1
chr17
43148368
43171037
-
FOXD3-AS1
chr1
63320884
63324441
-
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA