Entry Detail



General Information

Database ID:exR0017401
RNA Name:ADRM1
RNA Type:mRNA
Chromosome:chr20
Starnd:+
Coordinate:
Start Site(bp):62302093End Site(bp):62308862
External Links:ENSG00000130706



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
DDIT4
chr10
72273924
72276036
+
MIER2
chr19
301444
344815
-
TOPBP1
chr3
133598175
133662380
-
HLA-B
chr6
31269491
31357188
-
NPLOC4
chr17
81556887
81648465
-
P2RY11
chr19
10111693
10115372
+
TAGLN2
chr1
159918107
159925732
-
SREBF2
chr22
41833079
41907307
+
TUBA1B
chr12
49127782
49131397
-
DDX49
chr19
18919705
18929189
+
SELENOH
chr11
57741250
57743554
+
U2AF2
chr19
55654146
55674715
+
RPS9
chr19
54200809
54249003
+
MT-ND3
chrMT
10059
10404
+
PLEC
chr8
143915147
143976734
-
TEX261
chr2
70985942
70994873
-
OTUB1
chr11
63985853
64001811
+
GNAO1
chr16
56191489
56357444
+
GABARAP
chr17
7240008
7242449
-
VPS28
chr8
144423601
144428563
-
ENO1
chr1
8861000
8879190
-
TMEM8B
chr9
35814451
35865518
+
HSP90AB1
chr6
44246166
44253888
+
TMEM120B
chr12
121712752
121783001
+
NDUFV1
chr11
67605653
67612554
+
EMG1
chr12
6970913
6997428
+
MTREX
chr5
55307989
55425579
+
MT-CO3
chrMT
9207
9990
+
RGMB
chr5
98768650
98798643
+
ACAP3
chr1
1292390
1309609
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC139530.1
chr17
81701324
81703300
-
BX284668.2
chr1
16870945
16883659
+
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA