Entry Detail



General Information

Database ID:exR0017461
RNA Name:AHCY
RNA Type:mRNA
Chromosome:chr20
Starnd:-
Coordinate:
Start Site(bp):34280268End Site(bp):34311802
External Links:ENSG00000101444



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AASDHPPT
chr11
106075501
106098699
+
AASS
chr7
122073549
122144255
-
AATK
chr17
81110487
81166221
-
ABRACL
chr6
139028745
139043302
+
AC007192.1
chr19
18153158
18178117
+
AC008982.1
chr19
38817471
38840178
-
AC010422.3
chr19
12643831
12648397
-
AC011448.1
chr19
19516227
19536076
+
AC015813.2
chr17
57989038
58007246
-
AC087289.3
chr17
75898645
75930129
-
AC104109.3
chr5
134167170
134226071
-
AC105052.3
chr7
102637049
102671641
-
AC120057.2
chr17
7240427
7244635
-
ACAA2
chr18
49782164
49813953
-
ACAP1
chr17
7336529
7351477
+
ACKR3
chr2
236567787
236582354
+
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
ACTR3
chr2
113890063
113962596
+
ADIPOR1
chr1
202940826
202958572
-
ADIPOR2
chr12
1688574
1788674
+
ADPRH
chr3
119579268
119589945
+
ADPRHL2
chr1
36088892
36093932
+
ADSL
chr22
40346500
40390463
+
AEN
chr15
88621337
88632281
+
AGO1
chr1
35869808
35930532
+
AL022238.4
chr22
40346529
40410054
+
AL359922.1
chr9
21802636
22029594
+
ALDH18A1
chr10
95605941
95656711
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005618.1
chr5
141326210
141329357
+
AC008443.1
chr5
181246507
181272167
+
AC016876.2
chr17
7581964
7584086
-
AC026362.1
chr12
122975320
122982907
+
AC067852.2
chr17
42552436
42554748
-
AC091564.2
chr11
6603642
6604420
-
AD000090.1
chr19
35557956
35581954
+
AL022311.1
chr22
37876148
37895563
+
AL035458.2
chr20
34234840
34281173
-
AL118516.1
chr22
46761894
46762563
-
AC135178.6
chr17
8277763
8278436
+
AP005263.1
chr18
9102736
9254346
+
CYTOR
chr2
87454781
87636740
+
DHRS4-AS1
chr14
23938219
24052555
-
ESRG
chr3
54632122
54639857
-
LINC00545
chr13
30880912
30883395
+
LINC00941
chr12
30755167
30802602
+
LINC01278
chrX
63222993
63561095
-
LINC01578
chr15
92819540
92899701
+
NOP14-AS1
chr4
2934882
2961738
+
SNHG14
chr15
24978583
25420336
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA