Entry Detail



General Information

Database ID:exR0017468
RNA Name:AHR
RNA Type:mRNA
Chromosome:chr7
Starnd:+
Coordinate:
Start Site(bp):16916359End Site(bp):17346152
External Links:ENSG00000106546



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AKR1A1
chr1
45550543
45570049
+
AP3B1
chr5
78000525
78294755
-
CAPRIN1
chr11
34051731
34102610
+
CCDC91
chr12
28133249
28581511
+
CNN3
chr1
94896949
94927223
-
COMMD1
chr2
61888724
62147247
+
DCAF6
chr1
167935783
168075843
+
FLT4
chr5
180601506
180649624
-
GAPDH
chr12
6534512
6538374
+
HMGB2
chr4
173331376
173334432
-
LGALS9
chr17
27629798
27649560
+
MED28
chr4
17614641
17634105
+
NAGK
chr2
71064344
71079808
+
NOP53
chr19
47745546
47757058
+
PTBP1
chr19
797075
812327
+
RFTN1
chr3
16313574
16514026
-
RPS23
chr5
82273320
82278396
-
RPS5
chr19
58386400
58394806
+
SLC2A3
chr12
7919230
7936187
-
SRF
chr6
43171269
43181506
+
SRP9
chr1
225777813
225790468
+
USP53
chr4
119212587
119295517
+
YIPF6
chrX
68498562
68537282
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC019117.3
chr7
17374867
17467256
+
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA