Entry Detail



General Information

Database ID:exR0017475
RNA Name:AIF1
RNA Type:mRNA
Chromosome:chr6
Starnd:+
Coordinate:
Start Site(bp):31615217End Site(bp):31617021
External Links:ENSG00000204472



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AACS
chr12
125065434
125143333
+
AC008403.1
chr19
48465837
48472431
+
ANP32B
chr9
97983341
98015943
+
CCT7
chr2
73233420
73253021
+
COX7A2L
chr2
42333546
42425088
-
CYTH2
chr19
48469208
48482314
+
DAXX
chr6
33318558
33323016
-
GCK
chr7
44143213
44198170
-
IAH1
chr2
9473658
9496543
+
LEF1
chr4
108047545
108168956
-
NDUFA4
chr7
10931943
10940153
-
NDUFB9
chr8
124539101
124580648
+
RACK1
chr5
181236897
181248096
-
RBPJ
chr4
26163455
26435131
+
RPL27A
chr11
8682788
8714759
+
RPL37A
chr2
216498825
216579180
+
RPLP2
chr11
809965
812880
+
SIPA1L3
chr19
37907208
38208369
+
SRP9
chr1
225777813
225790468
+
TCF15
chr20
603797
610398
-
TUBA1A
chr12
49184795
49189080
-
UQCC3
chr11
62670273
62673686
+
ZNF322
chr6
26634383
26659752
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA