Entry Detail



General Information

Database ID:exR0017478
RNA Name:AIFM2
RNA Type:mRNA
Chromosome:chr10
Starnd:-
Coordinate:
Start Site(bp):70098223End Site(bp):70132934
External Links:ENSG00000042286



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AACS
chr12
125065434
125143333
+
AC105052.1
chr7
102582523
102642869
-
BTF3
chr5
73498408
73505635
+
DCP2
chr5
112976702
113022195
+
DNM2
chr19
10718079
10833488
+
FOXM1
chr12
2857681
2877155
-
FTL
chr19
48965309
48966879
+
GPX4
chr19
1103926
1106791
+
HMGN1
chr21
39342315
39349647
-
MT-CO3
chrMT
9207
9990
+
MUTYH
chr1
45329163
45340893
-
PAFAH1B1
chr17
2593210
2685615
+
PGK1
chrX
77910739
78129295
+
PLEKHM2
chr1
15684320
15734769
+
RASA4
chr7
102573807
102616757
-
RPL13
chr16
89560657
89566828
+
RPLP2
chr11
809965
812880
+
TPT1
chr13
45333471
45341370
-
TYSND1
chr10
70137981
70146700
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA