Entry Detail



General Information

Database ID:exR0017507
RNA Name:AKAP5
RNA Type:mRNA
Chromosome:chr14
Starnd:+
Coordinate:
Start Site(bp):64465499End Site(bp):64474503
External Links:ENSG00000179841



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC010463.1
chr19
17267418
17282966
+
AC023055.1
chr12
55757275
55827546
-
BABAM1
chr19
17267376
17281249
+
CNPY3
chr6
42929192
42939294
+
EIF3I
chr1
32221928
32231604
+
GNB1
chr1
1785285
1891117
-
PPP2R1B
chr11
111726908
111766389
-
PSMB5
chr14
23016543
23035230
-
RPS16
chr19
39433137
39435949
-
RPS3
chr11
75399515
75422280
+
SARNP
chr12
55752463
55817724
-
ZNF141
chr4
337814
384868
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA