Entry Detail



General Information

Database ID:exR0017518
RNA Name:AKR1A1
RNA Type:mRNA
Chromosome:chr1
Starnd:+
Coordinate:
Start Site(bp):45550543End Site(bp):45570049
External Links:ENSG00000117448



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
COG8
chr16
69320140
69339667
-
ATXN7L3
chr17
44191805
44200113
-
HNRNPUL1
chr19
41262496
41307787
+
SNRPB
chr20
2461634
2470853
-
ZMAT2
chr5
140698680
140706686
+
MRPL10
chr17
47823272
47831541
-
EPS15
chr1
51354263
51519266
-
FBLN1
chr22
45502238
45601135
+
EEF1G
chr11
62559596
62574086
-
SLC2A4RG
chr20
63739776
63744050
+
POU3F2
chr6
98834574
98839458
+
UBAP2L
chr1
154220179
154271510
+
PDK1
chr2
172555373
172608669
+
RNF126
chr19
647526
663233
-
MTRNR2L6
chr7
142666272
142667718
+
DR1
chr1
93345907
93369493
+
ZNF292
chr6
87152833
87265943
+
TKT
chr3
53224712
53256052
-
CLUH
chr17
2689386
2712663
-
FP565260.6
chr21
5155499
5165472
-
WDR74
chr11
62832342
62841809
-
SEC13
chr3
10293131
10321112
-
CDKN1A
chr6
36676460
36687339
+
MRPL33
chr2
27771717
27988087
+
RNF114
chr20
49936336
49953885
+
C1orf43
chr1
154206696
154220637
-
HDGF
chr1
156742109
156766925
-
NAA60
chr16
3443649
3486953
+
CBS
chr21
43053191
43076943
-
RPL3
chr22
39312882
39320389
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AD000090.1
chr19
35557956
35581954
+
AC069287.1
chr11
112967
125927
-
AL031005.1
chr1
21266082
21267251
+
AL359924.1
chr1
237862175
237928321
+
LINC01641
chr1
227393554
227431035
+
MALAT1
chr11
65497688
65506516
+
POLR2J4
chr7
43940895
44019175
-
SLX1A-SULT1A3
chr16
30193892
30204310
+
SNHG1
chr11
62851984
62855953
-
SNHG3
chr1
28505980
28510892
+
ZNF528-AS1
chr19
52388842
52397783
-
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA