Entry Detail



General Information

Database ID:exR0017533
RNA Name:AKTIP
RNA Type:mRNA
Chromosome:chr16
Starnd:-
Coordinate:
Start Site(bp):53491040End Site(bp):53504411
External Links:ENSG00000166971



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AHCYL1
chr1
109984765
110023742
+
AP002990.1
chr11
62559603
62591531
-
ATXN2L
chr16
28823035
28837237
+
EEF1G
chr11
62559596
62574086
-
EI24
chr11
125569280
125584684
+
EIF3H
chr8
116642130
116766925
-
ERG28
chr14
75649791
75660876
-
FGF2
chr4
122826708
122898236
+
FLRT3
chr20
14322985
14337614
-
FRAS1
chr4
78057323
78544269
+
HILPDA
chr7
128455849
128458418
+
HMGN3
chr6
79201245
79234738
-
MT-CO3
chrMT
9207
9990
+
NAPG
chr18
10525905
10552764
+
PIGX
chr3
196639775
196736007
+
PPP4R3B
chr2
55547292
55618880
-
PTGES3
chr12
56663341
56688408
-
SH3KBP1
chrX
19533977
19887600
-
SLC7A5
chr16
87830023
87869507
-
TMCO3
chr13
113491021
113554590
+
TMX1
chr14
51240162
51257655
+
TRIM71
chr3
32817997
32897824
+
TSPAN6
chrX
100627108
100639991
-
TUFM
chr16
28842411
28846348
-
UQCR10
chr22
29767369
29770413
+
VCPIP1
chr8
66628487
66667231
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA