Entry Detail



General Information

Database ID:exR0017542
RNA Name:ALDH1A2
RNA Type:mRNA
Chromosome:chr15
Starnd:-
Coordinate:
Start Site(bp):57953424End Site(bp):58497866
External Links:ENSG00000128918



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
CC2D1A
chr19
13906201
13930879
+
DDR1
chr6
30876421
30900156
+
LTBP4
chr19
40592883
40629818
+
MT-CO2
chrMT
7586
8269
+
MT-CYB
chrMT
14747
15887
+
NFATC2IP
chr16
28950807
28967097
+
PLCG2
chr16
81739097
81962685
+
RIPOR1
chr16
67518418
67546788
+
SENP3
chr17
7561919
7571969
+
SRCAP
chr16
30698209
30741409
+
TSC22D4
chr7
100463359
100479232
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA