Entry Detail



General Information

Database ID:exR0019337
RNA Name:CCNI
RNA Type:mRNA
Chromosome:chr4
Starnd:-
Coordinate:
Start Site(bp):77047155End Site(bp):77075989
External Links:ENSG00000118816



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCB7
chrX
75051048
75156732
-
ABCE1
chr4
145098288
145129524
+
AC004922.1
chr7
99325879
99394653
+
AC008982.1
chr19
38817471
38840178
-
AC011462.1
chr19
41350853
41425001
+
ACOT7
chr1
6264269
6394391
-
ACTG1
chr17
81509971
81523847
-
ADGRL3
chr4
61201258
62078335
+
AEN
chr15
88621337
88632281
+
AGAP3
chr7
151085831
151144436
+
AHCY
chr20
34280268
34311802
-
AHNAK
chr11
62433542
62556235
-
AKIRIN1
chr1
38991276
39006059
+
AL049629.2
chr11
33698261
33722467
-
ALDOA
chr16
30064164
30070457
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA