Entry Detail



General Information

Database ID:exR0021200
RNA Name:DPYSL3
RNA Type:mRNA
Chromosome:chr5
Starnd:-
Coordinate:
Start Site(bp):147390808End Site(bp):147510068
External Links:ENSG00000113657



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCC10
chr6
43427366
43450427
+
ABRACL
chr6
139028745
139043302
+
AC006030.1
chr2
74211604
74363377
-
AC091167.2
chr15
90249556
90272208
+
AC092647.5
chr7
55887277
55955239
+
ACACA
chr17
37084992
37406836
-
ACTG1
chr17
81509971
81523847
-
ACTN1
chr14
68874143
68979440
-
ACTR3
chr2
113890063
113962596
+
ACVR1C
chr2
157526767
157628864
-
ADGRL1
chr19
14147743
14206187
-
AEBP2
chr12
19404045
19720801
+
AFDN
chr6
167826922
167972023
+
AGPAT1
chr6
32168212
32178096
-
AHCY
chr20
34280268
34311802
-
AKT1
chr14
104769349
104795751
-
ALDH18A1
chr10
95605941
95656711
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC021242.3
chr8
9555144
9556520
-
AC027031.2
chr8
106270144
106272902
+
AC079781.5
chr7
97851688
97972985
-
AC106864.1
chr4
112693047
112706810
-
AC108449.2
chr8
29055935
29056685
+
AL022311.1
chr22
37876148
37895563
+
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA