Entry Detail



General Information

Database ID:exR0021294
RNA Name:DYNC1H1
RNA Type:mRNA
Chromosome:chr14
Starnd:+
Coordinate:
Start Site(bp):101964573End Site(bp):102056443
External Links:ENSG00000197102



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AATF
chr17
36948954
37056871
+
AC090004.1
chr3
14135217
14148252
+
AC093525.1
chr16
2513965
2527955
+
AC093525.2
chr16
2496032
2520218
+
AC104109.3
chr5
134167170
134226071
-
AC138969.1
chr16
16317444
16350590
+
AC245033.1
chr15
82536788
82573194
-
ACAA2
chr18
49782164
49813953
-
ADAMTS15
chr11
130448974
130476641
+
ADCY3
chr2
24819169
24919839
-
ADD2
chr2
70607618
70768225
-
AGRN
chr1
1020120
1056118
+
AIF1L
chr9
131096476
131123152
+
AK3
chr9
4709556
4742043
-
AKAP1
chr17
57085092
57121346
+
AL139300.1
chr14
103562962
103685924
+
AL162417.1
chr9
133098121
133163914
-
ALDH18A1
chr10
95605941
95656711
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-21-5p
chr17
59841273
59841294
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005899.4
chr17
32328441
32329395
+
AC008124.1
chr12
45718046
45727775
-
AC110285.2
chr17
81388126
81390319
-
AC245014.3
chr1
145281116
145281462
+
AL022157.1
chrX
57121662
57127243
+
AL110115.2
chr20
31580890
31581214
+
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA