Entry Detail



General Information

Database ID:exR0021480
RNA Name:EIF4A2
RNA Type:mRNA
Chromosome:chr3
Starnd:+
Coordinate:
Start Site(bp):186783205End Site(bp):186789897
External Links:ENSG00000156976



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABT1
chr6
26596953
26600739
+
AC005832.4
chr12
4604944
4662643
+
AC008878.3
chr19
7382834
7470241
+
AC008982.1
chr19
38817471
38840178
-
AC036214.3
chr8
79918860
80080775
-
AC073508.2
chr17
40627356
40665141
-
AC245033.1
chr15
82536788
82573194
-
ACAD9
chr3
128879596
128916067
+
ACTG1
chr17
81509971
81523847
-
ADAM10
chr15
58588809
58749791
-
ADD3
chr10
109996368
110135565
+
ADK
chr10
74151202
74709963
+
ADRM1
chr20
62302093
62308862
+
AEN
chr15
88621337
88632281
+
AFTPH
chr2
64524305
64593005
+
AGPAT3
chr21
43865223
43987592
+
AHCY
chr20
34280268
34311802
-
ALDH6A1
chr14
74056847
74084492
-
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-19b-3p
chr13
91351245
91351267
+
hsa-miR-21-5p
chr17
59841273
59841294
+
hsa-miR-1248
chr3
186786675
186786701
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007952.4
chr17
19112000
19112636
-
AC016876.2
chr17
7581964
7584086
-
AC051619.7
chr15
45200325
45200632
-
AC105942.1
chr1
94927361
94963616
+
AC106864.1
chr4
112693047
112706810
-
AC144548.1
chr12
110387463
110445548
-
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA