Entry Detail



General Information

Database ID:exR0021482
RNA Name:EIF4B
RNA Type:mRNA
Chromosome:chr12
Starnd:+
Coordinate:
Start Site(bp):53006158End Site(bp):53042209
External Links:ENSG00000063046



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABLIM1
chr10
114431113
114768061
-
AC008763.3
chr19
7678501
7682854
+
AC010422.3
chr19
12643831
12648397
-
AC011462.1
chr19
41350853
41425001
+
AC058822.1
chr4
53377839
54295272
+
AC073508.2
chr17
40627356
40665141
-
AC093525.1
chr16
2513965
2527955
+
AC124312.1
chr15
24955034
25000276
+
AC245033.1
chr15
82536788
82573194
-
ACADVL
chr17
7217125
7225266
+
ACOT8
chr20
45841721
45857405
-
ACSF2
chr17
50426158
50474845
+
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
ACVR1
chr2
157736444
157876330
-
ADAL
chr15
43330657
43354555
+
ADAR
chr1
154582057
154628013
-
ADIPOR2
chr12
1688574
1788674
+
ADORA2A
chr22
24417879
24442357
+
AEN
chr15
88621337
88632281
+
AGBL5
chr2
27042364
27070622
+
AHCY
chr20
34280268
34311802
-
AIG1
chr6
143060496
143341058
+
AIMP1
chr4
106315544
106349456
+
AKNA
chr9
114334156
114394405
-
AL121594.1
chr14
35122549
35317474
+
AL139011.2
chr1
160216800
160285130
-
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-3680-5p
chr16
21506101
21506122
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC018647.2
chr7
35695214
35699413
+
AC023509.1
chr12
53441741
53467528
+
AC245033.4
chr15
82533175
82540008
-
AD000090.1
chr19
35557956
35581954
+
AL022311.1
chr22
37876148
37895563
+
AL118506.1
chr20
63861212
63864293
-
AL121832.3
chr20
62402236
62405935
-
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA