Entry Detail



General Information

Database ID:exR0022295
RNA Name:FLNA
RNA Type:mRNA
Chromosome:chrX
Starnd:-
Coordinate:
Start Site(bp):154348524End Site(bp):154374638
External Links:ENSG00000196924



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AATF
chr17
36948954
37056871
+
ABCA2
chr9
137007234
137028922
-
ABHD17A
chr19
1876810
1885547
-
AC008403.1
chr19
48465837
48472431
+
AC008982.1
chr19
38817471
38840178
-
AC027644.4
chr7
66628958
66811189
+
AC138969.1
chr16
16317444
16350590
+
AC233992.2
chr8
144353228
144355609
-
AC245033.1
chr15
82536788
82573194
-
ACIN1
chr14
23058564
23095614
-
ACTB
chr7
5527148
5563784
-
ADAMTS1
chr21
26835755
26845409
-
ADAMTS19
chr5
129460281
129738683
+
ADAMTSL4
chr1
150549369
150560937
+
ADCY3
chr2
24819169
24919839
-
ADCY6
chr12
48766194
48789037
-
ADGRE5
chr19
14380501
14408725
+
ADIPOR1
chr1
202940826
202958572
-
ADNP2
chr18
80109262
80147523
+
AFDN
chr6
167826922
167972023
+
AFG3L2
chr18
12328944
12377227
-
AFMID
chr17
78187317
78207701
+
AGO2
chr8
140520156
140635633
-
AGPAT1
chr6
32168212
32178096
-
AGRN
chr1
1020120
1056118
+
AIP
chr11
67483026
67491103
+
AK4
chr1
65147549
65232145
+
AKT2
chr19
40230317
40285536
-
AL807752.6
chr9
137031241
137040436
-
ALDH7A1
chr5
126531200
126595362
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-103a-3p
chr5
168560904
168560926
-
hsa-miR-5100
chr10
42997630
42997651
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC015961.2
chr18
37243776
37247506
+
AC026362.1
chr12
122975320
122982907
+
AC079781.5
chr7
97851688
97972985
-
AD000090.1
chr19
35557956
35581954
+
AL021707.2
chr22
38667585
38681847
-
AL137127.1
chr1
19072110
19075511
-
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA