Entry Detail



General Information

Database ID:exR0022514
RNA Name:GABARAP
RNA Type:mRNA
Chromosome:chr17
Starnd:-
Coordinate:
Start Site(bp):7240008End Site(bp):7242449
External Links:ENSG00000170296



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007906.2
chr16
53035690
53052873
-
AC015813.2
chr17
57989038
58007246
-
AC027796.3
chr17
3585149
3636249
-
AC040162.1
chr16
67929614
67936017
-
AC120057.2
chr17
7240427
7244635
-
AC138811.2
chr16
18788063
18801519
-
ACAA2
chr18
49782164
49813953
-
ACPP
chr3
132317369
132368298
+
ACSL5
chr10
112374018
112428380
+
ACTB
chr7
5527148
5563784
-
ACTR1A
chr10
102461881
102502712
-
ACTR2
chr2
65227753
65271253
+
ADORA2A
chr22
24417879
24442357
+
ADRM1
chr20
62302093
62308862
+
AHCY
chr20
34280268
34311802
-
AKAP17A
chrX
1591604
1602520
+
AKAP8L
chr19
15380050
15419141
-
AL136295.1
chr14
24189157
24213473
-
ALDH18A1
chr10
95605941
95656711
-
ALDH7A1
chr5
126531200
126595362
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC132217.1
chr11
2129121
2129964
-
AL096870.2
chr14
24209646
24215987
-
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA