Entry Detail



General Information

Database ID:exR0022930
RNA Name:GOLPH3
RNA Type:mRNA
Chromosome:chr5
Starnd:-
Coordinate:
Start Site(bp):32124716End Site(bp):32174319
External Links:ENSG00000113384



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AAGAB
chr15
67200667
67255195
-
AASDH
chr4
56338287
56387508
-
ABHD17A
chr19
1876810
1885547
-
AC005258.1
chr19
2269525
2341172
+
AC010323.1
chr19
8308283
8321379
-
AC040162.1
chr16
67929614
67936017
-
AC139530.2
chr17
81703371
81720539
+
ACIN1
chr14
23058564
23095614
-
ACTB
chr7
5527148
5563784
-
ACVR1B
chr12
51951699
51997078
+
AD000671.1
chr19
35745678
35754519
+
ADAM11
chr17
44758988
44781846
+
ADGRB1
chr8
142449430
142545009
+
AKAP8
chr19
15353385
15379798
-
ALDOA
chr16
30064164
30070457
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC103702.1
chr17
48579630
48582259
-
AC113189.4
chr17
7439506
7445966
+
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA