Entry Detail



General Information

Database ID:exR0023173
RNA Name:GSTP1
RNA Type:mRNA
Chromosome:chr11
Starnd:+
Coordinate:
Start Site(bp):67583742End Site(bp):67586656
External Links:ENSG00000084207



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ADAM17
chr2
9488486
9556732
-
ACAD8
chr11
134253495
134265855
+
AC008982.1
chr19
38817471
38840178
-
ADCY7
chr16
50246137
50318135
+
AL035078.4
chr11
31812391
32104665
+
AL022238.4
chr22
40346529
40410054
+
ACTB
chr7
5527148
5563784
-
ACSF2
chr17
50426158
50474845
+
AC012184.2
chr16
70299194
70372582
+
ADRM1
chr20
62302093
62308862
+
ADCY3
chr2
24819169
24919839
-
AC010323.1
chr19
8308283
8321379
-
ACADVL
chr17
7217125
7225266
+
AC023055.1
chr12
55757275
55827546
-
ABCF3
chr3
184186023
184194012
+
ALDOA
chr16
30064164
30070457
+
ACTG1
chr17
81509971
81523847
-
ADGRL2
chr1
81306160
81992436
+
ABHD12
chr20
25294742
25390835
-
ABRAXAS2
chr10
124801819
124836667
+
AC004922.1
chr7
99325879
99394653
+
ACTR1B
chr2
97655939
97664044
-
AL132780.3
chr14
22946270
22982258
-
ADAR
chr1
154582057
154628013
-
AC010463.1
chr19
17267418
17282966
+
ACOT13
chr6
24667035
24705065
+
ACACA
chr17
37084992
37406836
-
ADSL
chr22
40346500
40390463
+
AC092073.1
chr19
34396315
34409364
+
ALDH1L1
chr3
126103562
126197994
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-23a-3p
chr19
13836595
13836615
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC009446.1
chr8
71675300
71702786
+
AC016876.2
chr17
7581964
7584086
-
AC026362.1
chr12
122975320
122982907
+
AC139149.1
chr17
81514047
81527776
+
AD000090.1
chr19
35557956
35581954
+
AL138828.1
chr6
135991936
136225751
-
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA