Entry Detail



General Information

Database ID:exR0023492
RNA Name:HNRNPA1
RNA Type:mRNA
Chromosome:chr12
Starnd:+
Coordinate:
Start Site(bp):54280193End Site(bp):54287088
External Links:ENSG00000135486



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AAGAB
chr15
67200667
67255195
-
AAMP
chr2
218264123
218270257
-
ABHD4
chr14
22598237
22613215
+
ABL1
chr9
130713016
130887675
+
AC004832.3
chr22
30409255
30428990
+
AC006064.6
chr12
6556886
6607367
-
AC010422.3
chr19
12643831
12648397
-
AC073082.1
chr2
48632291
48755724
-
AC120057.2
chr17
7240427
7244635
-
AC138894.1
chr16
28456371
28492098
-
ACKR3
chr2
236567787
236582354
+
ACOT8
chr20
45841721
45857405
-
ACTB
chr7
5527148
5563784
-
ACTR5
chr20
38748460
38772520
+
ADRM1
chr20
62302093
62308862
+
AGBL5
chr2
27042364
27070622
+
AHSA1
chr14
77457870
77469472
+
AKAP17A
chrX
1591604
1602520
+
ALDOA
chr16
30064164
30070457
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004069.1
chr4
105137280
105140619
-
AC008969.1
chr19
58002061
58011232
+
AC009055.2
chr16
65190973
65234914
-
AC087190.3
chr16
9104848
9113181
+
AC245014.3
chr1
145281116
145281462
+
AD000090.1
chr19
35557956
35581954
+
AGAP11
chr10
86970741
87010126
+
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA