Entry Detail



General Information

Database ID:exR0023497
RNA Name:HNRNPC
RNA Type:mRNA
Chromosome:chr14
Starnd:-
Coordinate:
Start Site(bp):21209136End Site(bp):21269494
External Links:ENSG00000092199



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AASS
chr7
122073549
122144255
-
ABHD4
chr14
22598237
22613215
+
ABLIM1
chr10
114431113
114768061
-
AC006064.6
chr12
6556886
6607367
-
AC006486.1
chr19
42234583
42255132
-
AC007192.1
chr19
18153158
18178117
+
AC011462.1
chr19
41350853
41425001
+
AC024592.3
chr19
5866171
5903787
-
AC026464.4
chr16
69299682
69322700
+
AC058822.1
chr4
53377839
54295272
+
AC092073.1
chr19
34396315
34409364
+
AC245033.1
chr15
82536788
82573194
-
ACAP2
chr3
195274745
195443044
-
ACIN1
chr14
23058564
23095614
-
ACTN1
chr14
68874143
68979440
-
ACTR6
chr12
100199122
100241865
+
ADGRV1
chr5
90529344
91164437
+
ADH5
chr4
99070978
99088801
-
AFDN
chr6
167826922
167972023
+
AGGF1
chr5
77029251
77065234
+
AJUBA
chr14
22971177
22982551
-
AKIRIN2
chr6
87674860
87702233
-
AL360181.3
chr10
133380017
133420271
+
ALDH18A1
chr10
95605941
95656711
-
ALDOA
chr16
30064164
30070457
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC006538.1
chr19
2727743
2729327
-
AC007952.4
chr17
19112000
19112636
-
AC008438.1
chr5
140370891
140401460
-
AC018521.1
chr17
47945424
47981736
+
AC023509.1
chr12
53441741
53467528
+
AC023908.2
chr15
39770559
39801333
-
AC106864.1
chr4
112693047
112706810
-
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA