Entry Detail



General Information

Database ID:exR0023730
RNA Name:ID1
RNA Type:mRNA
Chromosome:chr20
Starnd:+
Coordinate:
Start Site(bp):31605283End Site(bp):31606515
External Links:ENSG00000125968



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC008581.2
chr5
77030902
77152155
+
AC008878.3
chr19
7382834
7470241
+
AC010422.3
chr19
12643831
12648397
-
AC040162.1
chr16
67929614
67936017
-
ACADVL
chr17
7217125
7225266
+
ACBD6
chr1
180269653
180502954
-
ACTN4
chr19
38647649
38731589
+
ACTR1B
chr2
97655939
97664044
-
AEBP2
chr12
19404045
19720801
+
AGAP3
chr7
151085831
151144436
+
AGFG1
chr2
227472152
227561214
+
AGGF1
chr5
77029251
77065234
+
AGO4
chr1
35808016
35857890
+
AGPAT5
chr8
6708642
6761503
+
AKR7A2
chr1
19303965
19312146
-
AKT1S1
chr19
49869033
49878459
-
AKT3
chr1
243488233
243851079
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC132217.1
chr11
2129121
2129964
-
AL137782.1
chr13
75549773
75807120
+
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA