Entry Detail



General Information

Database ID:exR0024082
RNA Name:IRS4
RNA Type:mRNA
Chromosome:chrX
Starnd:-
Coordinate:
Start Site(bp):108732482End Site(bp):108736409
External Links:ENSG00000133124



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004922.1
chr7
99325879
99394653
+
ADM
chr11
10305073
10307397
+
ADPRHL2
chr1
36088892
36093932
+
AKT1S1
chr19
49869033
49878459
-
AL138752.2
chr9
37588413
38068687
-
AL139353.1
chr14
31334312
31457441
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC011445.1
chr19
39314651
39320858
-
AC040162.3
chr16
67882461
67886367
+
AC084125.2
chr8
144495458
144505444
-
AC108134.2
chr16
3156736
3157483
-
AD000090.1
chr19
35557956
35581954
+
AL049840.4
chr14
103694516
103695050
-
AL110115.2
chr20
31580890
31581214
+
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA