Entry Detail



General Information

Database ID:exR0024443
RNA Name:KIF1A
RNA Type:mRNA
Chromosome:chr2
Starnd:-
Coordinate:
Start Site(bp):240713761End Site(bp):240821036
External Links:ENSG00000130294



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC006486.1
chr19
42234583
42255132
-
AC009690.3
chr15
72266746
72319946
-
AC124312.1
chr15
24955034
25000276
+
ACAP3
chr1
1292390
1309609
-
ACTN1
chr14
68874143
68979440
-
ADAMTS20
chr12
43353866
43552203
-
ADCY3
chr2
24819169
24919839
-
AGAP1
chr2
235494043
236131800
+
AGO1
chr1
35869808
35930532
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004080.6
chr7
27128969
27152561
-
AC004951.1
chr7
44004046
44007866
-
AC016876.2
chr17
7581964
7584086
-
AC026740.1
chr5
675826
676616
+
AC034198.2
chr3
12832219
12832728
-
AC093673.1
chr7
143379692
143380495
-
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA