Entry Detail


General Information

Database ID:exR0085534
RNA Name:hsa-miR-147a
RNA Type:miRNA
Chromosome:chr9
Starnd:-
Coordinate:
Start Site(bp):120244985End Site(bp):120245004
External Links:hsa-miR-147a



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE126399
Description:Ascites-derived circulating microRNAs as potential diagnostic biomarkers of gastric cancer-associated malignant ascites
Experimental Design:Disease vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Liver Cirrhosis
Number of Case:12
Number of Control:10
Number of Samples:22





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
TWF1
chr12
43793723
43806375
-
GLYR1
chr16
4803203
4847288
-
PLPP6
chr9
4662294
4665258
+
USP37
chr2
218450251
218568351
-
CTSD
chr11
1752755
1764573
-
NUP58
chr13
25301556
25349800
+
JARID2
chr6
15246069
15522042
+
SCARB1
chr12
124776856
124882668
-
MGRN1
chr16
4616493
4690974
+
CRKL
chr22
20917407
20953747
+
SIPA1L3
chr19
37907208
38208369
+
TIMP3
chr22
32801701
32863043
+
SNAI2
chr8
48917598
48921740
-
FAM13A
chr4
88725955
89111398
-
ZNF618
chr9
113876282
114056591
+
SMIM12
chr1
34712737
34859755
-
CCND1
chr11
69641156
69654474
+
FOXK2
chr17
82519713
82644662
+
SLC7A1
chr13
29509414
29595688
-
ATP11A
chr13
112690329
112887168
+
PSME3
chr17
42824385
42843760
+
WIZ
chr19
15419978
15449956
-
PURA
chr5
140107777
140125619
+
STARD7
chr2
96184859
96208825
-
OSBPL9
chr1
51577179
51798427
+
PIK3C2A
chr11
17077730
17207983
-
NKIRAS2
chr17
42011382
42025644
+
LIMD1
chr3
45555394
45686341
+
TNFRSF10B
chr8
23020133
23069031
-
ARHGAP35
chr19
46860997
47005077
+
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0000816
chr17
80521229
80526077
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004951.4
chr7
43951910
44019151
-
AC010442.1
chr5
466124
473098
-
AL355987.2
chr9
136800366
136829466
+
DSCAM-AS1
chr21
40383083
40385358
+
KCNQ1OT1
chr11
2608328
2699994
-
MIR503HG
chrX
134543119
134546642
-
NEAT1
chr11
65422774
65445540
+
POLR2J4
chr7
43940895
44019175
-
Display:



Experiment Detail

GEO ID:GSE126399
Sample Source:Ascite
Source Fraction:Exosome
Platform:GPL18402
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:1972
Sample treatment protocol:Exosome from biofluid was precipitated using miRCURY Exosome Isolation Kit (Exiqon).
RNA Extract protocol:Exosomal RNA was isolated using Trizol LS Reagent (Molecular Research Center, Cincinnati, OH, USA).
RNA library preparation protocol:Cyanine 3-labeled cRNA (complementary RNA) was generated from Agilent's Low RNA Input Linear Amplification kit with 500ng total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA