Entry Detail


General Information

Database ID:exR0085653
RNA Name:hsa-miR-206
RNA Type:miRNA
Chromosome:chr6
Starnd:+
Coordinate:
Start Site(bp):52144401End Site(bp):52144422
External Links:hsa-miR-206



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE126399
Description:Ascites-derived circulating microRNAs as potential diagnostic biomarkers of gastric cancer-associated malignant ascites
Experimental Design:Disease vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Liver Cirrhosis
Number of Case:12
Number of Control:10
Number of Samples:22





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
CAPNS1
chr19
36139953
36150353
+
NPEPPS
chr17
47522942
47623276
+
SPRED1
chr15
38252836
38357249
+
SLC30A7
chr1
100896076
100981757
+
DDX5
chr17
64498254
64508199
-
TRIM2
chr4
153152342
153339317
+
DLG3
chrX
70444835
70505490
+
LASP1
chr17
38869859
38921770
+
RTL8B
chrX
135020513
135022542
-
FOXP1
chr3
70952817
71583993
-
SDCBP
chr8
58552924
58582859
+
NME1-NME2
chr17
51153590
51171744
+
NR2C2
chr3
14947584
15053600
+
TNRC6B
chr22
40044817
40335808
+
CREB3L2
chr7
137874979
138002086
-
NETO2
chr16
47077703
47143945
-
ZNF518A
chr10
96129715
96205288
+
PGM2
chr4
37826660
37862937
+
PRR12
chr19
49591182
49626439
+
PTBP1
chr19
797075
812327
+
CALM1
chr14
90396502
90408268
+
NME2
chr17
51165435
51171747
+
AP1S1
chr7
101154456
101161596
+
MAPK1
chr22
21754500
21867680
-
GID4
chr17
18039408
18068405
+
SMCO4
chr11
93478472
93543391
-
SS18
chr18
26016253
26091217
-
CWC15
chr11
94962620
94973586
-
WIPF2
chr17
40219304
40284136
+
WDR5
chr9
134135365
134159968
+
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0000816
chr17
80521229
80526077
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005332.7
chr17
68188547
68189165
+
AC145207.5
chr17
81878425
81881106
-
LINC00641
chr14
21200079
21206900
-
MALAT1
chr11
65497688
65506516
+
MIR4435-2HG
chr2
111006015
111523376
-
NEAT1
chr11
65422774
65445540
+
RMRP
chr9
35657751
35658018
-
Display:



Experiment Detail

GEO ID:GSE126399
Sample Source:Ascite
Source Fraction:Exosome
Platform:GPL18402
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:1972
Sample treatment protocol:Exosome from biofluid was precipitated using miRCURY Exosome Isolation Kit (Exiqon).
RNA Extract protocol:Exosomal RNA was isolated using Trizol LS Reagent (Molecular Research Center, Cincinnati, OH, USA).
RNA library preparation protocol:Cyanine 3-labeled cRNA (complementary RNA) was generated from Agilent's Low RNA Input Linear Amplification kit with 500ng total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA