Entry Detail


General Information

Database ID:exR0085691
RNA Name:hsa-miR-22-3p
RNA Type:miRNA
Chromosome:chr17
Starnd:-
Coordinate:
Start Site(bp):1713914End Site(bp):1713935
External Links:hsa-miR-22-3p



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE126399
Description:Ascites-derived circulating microRNAs as potential diagnostic biomarkers of gastric cancer-associated malignant ascites
Experimental Design:Disease vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Liver Cirrhosis
Number of Case:12
Number of Control:10
Number of Samples:22





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
CCDC97
chr19
41310172
41324873
+
AP1S1
chr7
101154456
101161596
+
RCOR1
chr14
102592649
102730561
+
RAB11FIP4
chr17
31391675
31538211
+
PPIF
chr10
79347469
79355334
+
FBXL19
chr16
30923055
30948783
+
FNBP4
chr11
47716494
47767443
-
DCP1A
chr3
53283429
53347586
-
GDAP1
chr8
74321130
74488872
+
WSB2
chr12
118032694
118062430
-
ITGA5
chr12
54395261
54419266
-
IRS2
chr13
109752695
109786583
-
FOXP1
chr3
70952817
71583993
-
TMEM179B
chr11
62787402
62790400
+
ETS1
chr11
128458761
128587558
-
ATP2C1
chr3
130850595
131016712
+
ZNF740
chr12
53180704
53195142
+
CACUL1
chr10
118674167
118755249
-
ATP6V0B
chr1
43974487
43978295
+
ACLY
chr17
41866917
41930542
-
CLASP1
chr2
121337776
121649587
-
PRLR
chr5
35048756
35230487
-
PDPR
chr16
70113626
70162537
+
WWC2
chr4
183099257
183320777
+
TAGLN
chr11
117199370
117207464
+
BCL9
chr1
147541501
147626216
+
GLIS2
chr16
4314761
4339597
+
GBF1
chr10
102245532
102382899
+
PDSS1
chr10
26697701
26746798
+
RANBP2
chr2
108719482
108785809
+
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0001699
chr7
40027197
40041630
+
hsa_circ_0001414
chr4
56277780
56284152
+
hsa_circ_0000733
chr17
1561546
1562030
-
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC021078.1
chr5
149494314
149504670
-
AL360012.1
chr1
28648600
28648730
+
MALAT1
chr11
65497688
65506516
+
NEAT1
chr11
65422774
65445540
+
NORAD
chr20
36045618
36051018
-
OIP5-AS1
chr15
41283990
41309737
+
SNHG16
chr17
76557764
76565348
+
Display:



Experiment Detail

GEO ID:GSE126399
Sample Source:Ascite
Source Fraction:Exosome
Platform:GPL18402
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:1972
Sample treatment protocol:Exosome from biofluid was precipitated using miRCURY Exosome Isolation Kit (Exiqon).
RNA Extract protocol:Exosomal RNA was isolated using Trizol LS Reagent (Molecular Research Center, Cincinnati, OH, USA).
RNA library preparation protocol:Cyanine 3-labeled cRNA (complementary RNA) was generated from Agilent's Low RNA Input Linear Amplification kit with 500ng total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA