Entry Detail


General Information

Database ID:exR0085760
RNA Name:hsa-miR-302d-3p
RNA Type:miRNA
Chromosome:chr4
Starnd:-
Coordinate:
Start Site(bp):112648006End Site(bp):112648028
External Links:hsa-miR-302d-3p



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE126399
Description:Ascites-derived circulating microRNAs as potential diagnostic biomarkers of gastric cancer-associated malignant ascites
Experimental Design:Disease vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Liver Cirrhosis
Number of Case:12
Number of Control:10
Number of Samples:22





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
POLR3G
chr5
90471748
90514557
+
RPL27
chr17
42998273
43002959
+
MSL1
chr17
40121971
40136917
+
MGLL
chr3
127689062
128052190
-
WASF3
chr13
26557683
26688948
+
CCNE1
chr19
29811991
29824312
+
PPIB
chr15
64155812
64163205
-
CDK6
chr7
92604921
92836594
-
CLOCK
chr4
55427903
55546909
-
QRICH1
chr3
49029707
49094363
-
FBXO5
chr6
152970519
152983579
-
VPS35
chr16
46656132
46689518
-
PXYLP1
chr3
141228726
141367753
+
ATP6V1C1
chr8
103021063
103073051
+
FYCO1
chr3
45917899
45995824
-
TXNIP
chr1
145992435
145996579
-
KDM4B
chr19
4969113
5153598
+
PNPLA8
chr7
108470417
108569666
-
AMPD2
chr1
109616104
109632053
+
MMD
chr17
55392622
55421924
-
ZNF608
chr5
124636913
124748807
-
PLAGL2
chr20
32192504
32207743
-
EPHX1
chr1
225810092
225845563
+
COPS5
chr8
67043079
67083783
-
MRPS6
chr21
34073224
34143034
+
RIT1
chr1
155897808
155911404
-
HNRNPH2
chrX
101408222
101414133
+
BCLAF1
chr6
136256627
136289851
-
BTN3A1
chr6
26402237
26415208
+
COL4A2
chr13
110305812
110513209
+
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0000943
chr19
47421744
47440665
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC011503.2
chr19
23927788
23929287
+
AL049840.4
chr14
103694516
103695050
-
ARHGAP27P1-BPTFP1-KPNA2P3
chr17
64749663
64781707
-
FGD5-AS1
chr3
14920347
14948424
-
MIR17HG
chr13
91347820
91354579
+
NEAT1
chr11
65422774
65445540
+
NORAD
chr20
36045618
36051018
-
SNHG16
chr17
76557764
76565348
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE126399
Sample Source:Ascite
Source Fraction:Exosome
Platform:GPL18402
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:1972
Sample treatment protocol:Exosome from biofluid was precipitated using miRCURY Exosome Isolation Kit (Exiqon).
RNA Extract protocol:Exosomal RNA was isolated using Trizol LS Reagent (Molecular Research Center, Cincinnati, OH, USA).
RNA library preparation protocol:Cyanine 3-labeled cRNA (complementary RNA) was generated from Agilent's Low RNA Input Linear Amplification kit with 500ng total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA