Entry Detail


General Information

Database ID:exR0086254
RNA Name:hsa-miR-4426
RNA Type:miRNA
Chromosome:chr1
Starnd:+
Coordinate:
Start Site(bp):192716333End Site(bp):192716349
External Links:hsa-miR-4426



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE126399
Description:Ascites-derived circulating microRNAs as potential diagnostic biomarkers of gastric cancer-associated malignant ascites
Experimental Design:Disease vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Liver Cirrhosis
Number of Case:12
Number of Control:10
Number of Samples:22





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
UFC1
chr1
161152776
161158856
+
NDUFA4
chr7
10931943
10940153
-
N4BP3
chr5
178113532
178126081
+
MTRNR2L11
chr1
237943724
237945275
-
RNF181
chr2
85595725
85597708
+
VMP1
chr17
59707192
59842255
+
DDB1
chr11
61299451
61342596
-
SAP18
chr13
21140514
21149084
+
DOCK6
chr19
11199295
11262524
-
NSMAF
chr8
58583508
58659853
-
APP
chr21
25880550
26171128
-
TMEM170A
chr16
75443054
75465497
-
TKFC
chr11
61333210
61353295
+
CTSZ
chr20
58995185
59007254
-
AL136454.1
chr1
192716132
192716653
+
TPT1
chr13
45333471
45341370
-
PTPN6
chr12
6946468
6961316
+
CAPNS1
chr19
36139953
36150353
+
CCNL2
chr1
1385711
1399335
-
RABGAP1L
chr1
174159410
174995308
+
RACK1
chr5
181236897
181248096
-
HMGN2
chr1
26472440
26476642
+
SEZ6L2
chr16
29871159
29899547
-
GAPDH
chr12
6534512
6538374
+
CD52
chr1
26317958
26320523
+
PCBP2
chr12
53452102
53481162
+
NDUFA11
chr19
5891276
5904006
-
REXO1
chr19
1815248
1848483
-
ZNF655
chr7
99558406
99576453
+
DCAF12
chr9
34086387
34127399
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC023509.1
chr12
53441741
53467528
+
AC105942.1
chr1
94927361
94963616
+
Display:



Experiment Detail

GEO ID:GSE126399
Sample Source:Ascite
Source Fraction:Exosome
Platform:GPL18402
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:1972
Sample treatment protocol:Exosome from biofluid was precipitated using miRCURY Exosome Isolation Kit (Exiqon).
RNA Extract protocol:Exosomal RNA was isolated using Trizol LS Reagent (Molecular Research Center, Cincinnati, OH, USA).
RNA library preparation protocol:Cyanine 3-labeled cRNA (complementary RNA) was generated from Agilent's Low RNA Input Linear Amplification kit with 500ng total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA