Entry Detail


General Information

Database ID:exR0086347
RNA Name:hsa-miR-4508
RNA Type:miRNA
Chromosome:chr15
Starnd:-
Coordinate:
Start Site(bp):23562107End Site(bp):23562123
External Links:hsa-miR-4508



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE126399
Description:Ascites-derived circulating microRNAs as potential diagnostic biomarkers of gastric cancer-associated malignant ascites
Experimental Design:Disease vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Liver Cirrhosis
Number of Case:12
Number of Control:10
Number of Samples:22





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
USP22
chr17
20999596
21043760
-
AC005943.1
chr19
1578339
1605445
-
ADNP2
chr18
80109262
80147523
+
ANAPC1
chr2
111611639
111884690
-
ANKRD54
chr22
37830855
37849327
-
CDC42BPB
chr14
102932380
103057549
-
COA1
chr7
43608456
43729717
-
CSNK1G2
chr19
1941172
1981338
+
CTC1
chr17
8224815
8248056
-
EID2
chr19
39538707
39540161
-
ESYT2
chr7
158730995
158830253
-
FUS
chr16
31180110
31194871
+
LTBP3
chr11
65538805
65558930
-
MBD3
chr19
1573596
1592865
-
NDUFB4
chr3
120596328
120602507
+
OXTR
chr3
8750408
8769628
-
PROB1
chr5
139390592
139395104
-
SCAF4
chr21
31671000
31732118
-
SLBP
chr4
1692731
1712344
-
TM9SF1
chr14
24189149
24195687
-
TMCO3
chr13
113491021
113554590
+
UBE3A
chr15
25333728
25439051
-
URI1
chr19
29923644
30016612
+
UROS
chr10
125784980
125823258
-
USP28
chr11
113797874
113875570
-
WRAP53
chr17
7686071
7703502
+
ZNF580
chr19
55635016
55643470
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
HCG18
chr6
30286690
30327382
-
Display:



Experiment Detail

GEO ID:GSE126399
Sample Source:Ascite
Source Fraction:Exosome
Platform:GPL18402
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:1972
Sample treatment protocol:Exosome from biofluid was precipitated using miRCURY Exosome Isolation Kit (Exiqon).
RNA Extract protocol:Exosomal RNA was isolated using Trizol LS Reagent (Molecular Research Center, Cincinnati, OH, USA).
RNA library preparation protocol:Cyanine 3-labeled cRNA (complementary RNA) was generated from Agilent's Low RNA Input Linear Amplification kit with 500ng total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA