Entry Detail


General Information

Database ID:exR0086764
RNA Name:hsa-miR-512-3p
RNA Type:miRNA
Chromosome:chr19
Starnd:+
Coordinate:
Start Site(bp):53666729End Site(bp):53666750
External Links:hsa-miR-512-3p



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE126399
Description:Ascites-derived circulating microRNAs as potential diagnostic biomarkers of gastric cancer-associated malignant ascites
Experimental Design:Disease vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Liver Cirrhosis
Number of Case:12
Number of Control:10
Number of Samples:22





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
IFNAR1
chr21
33324429
33359864
+
RAI14
chr5
34656328
34832612
+
NAA16
chr13
41311267
41377030
+
TOB2
chr22
41433494
41446801
-
ASB1
chr2
238426742
238452250
+
RIT1
chr1
155897808
155911404
-
C9orf40
chr9
74946583
74952912
-
STK40
chr1
36339624
36385896
-
LETMD1
chr12
51047962
51060424
+
IQSEC1
chr3
12897043
13283281
-
COQ10B
chr2
197453423
197475308
+
ZCCHC3
chr20
297570
300321
+
FAM120AOS
chr9
93431441
93453581
-
NSD2
chr4
1871393
1982207
+
MTMR12
chr5
32226994
32312987
-
ZNF28
chr19
52797408
52857600
-
WASL
chr7
123681943
123749003
-
TOMM6
chr6
41787662
41789898
+
AP3M1
chr10
74120255
74151063
-
OCRL
chrX
129539849
129592561
+
SYVN1
chr11
65121780
65134533
-
LONP2
chr16
48244300
48363122
+
MID1IP1
chrX
38801432
38806537
+
SBF1
chr22
50445000
50475035
-
TNRC6A
chr16
24610209
24827632
+
RAB31
chr18
9708275
9862551
+
UHRF1BP1
chr6
34792015
34883138
+
ERMP1
chr9
5765076
5833117
-
ATP6V1E1
chr22
17592136
17628749
-
TRIB1
chr8
125430358
125438403
+
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0001731
chr7
100731990
100738448
+
hsa_circ_0000384
chr12
27867712
27877119
+
hsa_circ_0001159
chr20
40161688
40179999
-
hsa_circ_0001865
chr9
86292641
86293514
-
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004687.1
chr17
58330884
58332508
-
AC091564.7
chr11
6610883
6616594
-
AC092718.4
chr16
81030770
81031485
+
FGD5-AS1
chr3
14920347
14948424
-
MIR497HG
chr17
7015818
7019659
-
NEAT1
chr11
65422774
65445540
+
NORAD
chr20
36045618
36051018
-
TUG1
chr22
30969245
30979395
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE126399
Sample Source:Ascite
Source Fraction:Exosome
Platform:GPL18402
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:1972
Sample treatment protocol:Exosome from biofluid was precipitated using miRCURY Exosome Isolation Kit (Exiqon).
RNA Extract protocol:Exosomal RNA was isolated using Trizol LS Reagent (Molecular Research Center, Cincinnati, OH, USA).
RNA library preparation protocol:Cyanine 3-labeled cRNA (complementary RNA) was generated from Agilent's Low RNA Input Linear Amplification kit with 500ng total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA