Entry Detail


General Information

Database ID:exR0087207
RNA Name:hsa-miR-7-5p
RNA Type:miRNA
Chromosome:chr19
Starnd:+
Coordinate:
Start Site(bp):4770700End Site(bp):4770723
External Links:hsa-miR-7-5p



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE126399
Description:Ascites-derived circulating microRNAs as potential diagnostic biomarkers of gastric cancer-associated malignant ascites
Experimental Design:Disease vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Liver Cirrhosis
Number of Case:12
Number of Control:10
Number of Samples:22





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
RCC2
chr1
17406760
17439677
-
GNA12
chr7
2728105
2844308
-
RAB29
chr1
205767986
205775482
-
TSPAN14
chr10
80454166
80533124
+
INTS2
chr17
61865367
61928016
-
ACVR1B
chr12
51951699
51997078
+
RPS6KB1
chr17
59893046
59950574
+
SCD
chr10
100347233
100364826
+
INSR
chr19
7112255
7294414
-
SLC25A44
chr1
156193932
156212796
+
KMT2D
chr12
49018975
49059774
-
ORAI1
chr12
121626550
121642677
+
ATXN1
chr6
16299112
16761491
-
NAPA
chr19
47487637
47515091
-
HP1BP3
chr1
20740266
20787323
-
SETD7
chr4
139495941
139606699
-
PLXNA1
chr3
126988594
127037392
+
KLHL18
chr3
47282917
47346816
+
IRS2
chr13
109752695
109786583
-
CBL
chr11
119206298
119313926
+
VPS4A
chr16
69311350
69326939
+
DNAJC9
chr10
73183362
73247255
-
PATL1
chr11
59636716
59669037
-
MEPCE
chr7
100428790
100434118
+
FYCO1
chr3
45917899
45995824
-
JAM3
chr11
134069071
134152001
+
HMGA2
chr12
65824131
65966295
+
TM4SF1
chr3
149369022
149377692
-
DHCR24
chr1
54849627
54887195
-
RUSC1
chr1
155320894
155331114
+
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0000712
chr16
68208276
68225678
+
hsa_circ_0001168
chr20
47691321
47707559
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC016876.2
chr17
7581964
7584086
-
AC105339.2
chr15
82752884
82757208
+
AL096870.2
chr14
24209646
24215987
-
AL590617.2
chr6
138692548
138697288
+
MIR497HG
chr17
7015818
7019659
-
OIP5-AS1
chr15
41283990
41309737
+
SNHG1
chr11
62851984
62855953
-
TBC1D3P1-DHX40P1
chr17
59962363
60018975
-
U91328.1
chr6
25992641
26001775
+
XIST
chrX
73820649
73852723
-
ZFAS1
chr20
49278178
49299600
+
Display:



Experiment Detail

GEO ID:GSE126399
Sample Source:Ascite
Source Fraction:Exosome
Platform:GPL18402
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:1972
Sample treatment protocol:Exosome from biofluid was precipitated using miRCURY Exosome Isolation Kit (Exiqon).
RNA Extract protocol:Exosomal RNA was isolated using Trizol LS Reagent (Molecular Research Center, Cincinnati, OH, USA).
RNA library preparation protocol:Cyanine 3-labeled cRNA (complementary RNA) was generated from Agilent's Low RNA Input Linear Amplification kit with 500ng total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA