Entry Detail


General Information

Database ID:exR0087227
RNA Name:hsa-miR-769-5p
RNA Type:miRNA
Chromosome:chr19
Starnd:+
Coordinate:
Start Site(bp):46018961End Site(bp):46018982
External Links:hsa-miR-769-5p



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE126399
Description:Ascites-derived circulating microRNAs as potential diagnostic biomarkers of gastric cancer-associated malignant ascites
Experimental Design:Disease vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Liver Cirrhosis
Number of Case:12
Number of Control:10
Number of Samples:22





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ACVR1B
chr12
51951699
51997078
+
ANGEL1
chr14
76786168
76826246
-
ASB1
chr2
238426742
238452250
+
BMPR2
chr2
202376327
202567751
+
CAPNS1
chr19
36139953
36150353
+
CBFB
chr16
67028984
67101058
+
CLDN11
chr3
170418865
170454733
+
CLN8
chr8
1755778
1801711
+
DBNDD1
chr16
90004871
90020128
-
DCTN4
chr5
150708440
150759109
-
EIF1AD
chr11
65996545
66002176
-
EIF1AX
chrX
20124525
20141838
-
FOXK1
chr7
4682295
4771442
+
LONRF2
chr2
100271875
100322501
-
MDM4
chr1
204516379
204558120
+
MRTO4
chr1
19251805
19260128
+
NUSAP1
chr15
41320794
41381050
+
PLCD3
chr17
45108959
45133354
-
PRKAA1
chr5
40759379
40798374
-
PXN
chr12
120210439
120265771
-
RHPN1
chr8
143368876
143384221
+
RUNX1
chr21
34787801
36004667
-
TFAP4
chr16
4257186
4273075
-
VAT1
chr17
43014607
43025123
-
YPEL5
chr2
30146941
30160533
+
ZDHHC9
chrX
129803288
129843909
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC245033.4
chr15
82533175
82540008
-
LINC00324
chr17
8220642
8224043
-
MALAT1
chr11
65497688
65506516
+
SNHG1
chr11
62851984
62855953
-
Display:



Experiment Detail

GEO ID:GSE126399
Sample Source:Ascite
Source Fraction:Exosome
Platform:GPL18402
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:1972
Sample treatment protocol:Exosome from biofluid was precipitated using miRCURY Exosome Isolation Kit (Exiqon).
RNA Extract protocol:Exosomal RNA was isolated using Trizol LS Reagent (Molecular Research Center, Cincinnati, OH, USA).
RNA library preparation protocol:Cyanine 3-labeled cRNA (complementary RNA) was generated from Agilent's Low RNA Input Linear Amplification kit with 500ng total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA