Entry Detail


General Information

Database ID:exR0087230
RNA Name:hsa-miR-873-3p
RNA Type:miRNA
Chromosome:chr9
Starnd:-
Coordinate:
Start Site(bp):28888889End Site(bp):28888910
External Links:hsa-miR-873-3p



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE126399
Description:Ascites-derived circulating microRNAs as potential diagnostic biomarkers of gastric cancer-associated malignant ascites
Experimental Design:Disease vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Liver Cirrhosis
Number of Case:12
Number of Control:10
Number of Samples:22





Regulatory Relationship

mRNA targets:NA
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0001658
chr6
157357968
157406039
+
hsa_circ_0000798
chr17
65941524
65944422
+
hsa_circ_0001387
chr4
1902352
1936989
+
hsa_circ_0000799
chr17
65941524
65972074
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC020978.4
chr16
68236845
68237667
-
AC021078.1
chr5
149494314
149504670
-
AC023509.1
chr12
53441741
53467528
+
CYTOR
chr2
87454781
87636740
+
EBLN3P
chr9
37079645
37090928
+
KCNQ1OT1
chr11
2608328
2699994
-
LINC00265
chr7
39733430
39793092
+
LINC00641
chr14
21200079
21206900
-
LINC00665
chr19
36313067
36331770
-
MIR4435-2HG
chr2
111006015
111523376
-
NORAD
chr20
36045618
36051018
-
PARD6G-AS1
chr18
80147924
80179839
+
PCBP2-OT1
chr12
53464468
53465057
+
SNHG16
chr17
76557764
76565348
+
SNHG8
chr4
118278709
118285316
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE126399
Sample Source:Ascite
Source Fraction:Exosome
Platform:GPL18402
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:1972
Sample treatment protocol:Exosome from biofluid was precipitated using miRCURY Exosome Isolation Kit (Exiqon).
RNA Extract protocol:Exosomal RNA was isolated using Trizol LS Reagent (Molecular Research Center, Cincinnati, OH, USA).
RNA library preparation protocol:Cyanine 3-labeled cRNA (complementary RNA) was generated from Agilent's Low RNA Input Linear Amplification kit with 500ng total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA