Entry Detail



General Information

Database ID:exR0206878
RNA Name:RMRP
RNA Type:lncRNA
Chromosome:chr9
Starnd:-
Coordinate:
Start Site(bp):35657751End Site(bp):35658018
External Links:ENSG00000269900



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCF3
chr3
184186023
184194012
+
ABR
chr17
1003518
1229738
-
AC005258.1
chr19
2269525
2341172
+
AC092143.1
chr16
89919165
89936092
+
AC124312.1
chr15
24955034
25000276
+
ACACA
chr17
37084992
37406836
-
ACTN4
chr19
38647649
38731589
+
ADAMTS1
chr21
26835755
26845409
-
AFMID
chr17
78187317
78207701
+
AHNAK
chr11
62433542
62556235
-
AKAP8L
chr19
15380050
15419141
-
AL035078.4
chr11
31812391
32104665
+
AC011005.1
chr7
129126518
129130793
+
AC011462.1
chr19
41350853
41425001
+
ACTL6A
chr3
179562886
179588407
+
AHSA1
chr14
77457870
77469472
+
AKT3
chr1
243488233
243851079
-
AL136295.4
chr14
24180395
24190416
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-1-3p
chr18
21829015
21829036
-
hsa-miR-206
chr6
52144401
52144422
+
hsa-miR-580-3p
chr5
36147907
36147928
-
hsa-miR-613
chr12
12764709
12764728
+
hsa-miR-3142
chr5
160474450
160474471
+
hsa-miR-1245b-5p
chr2
188978133
188978153
-
hsa-miR-766-5p
chrX
119646799
119646820
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007952.4
chr17
19112000
19112636
-
AC008050.1
chr14
76495363
76726712
-
AC016405.3
chr8
122779971
122780830
-
AC016876.2
chr17
7581964
7584086
-
AC023509.1
chr12
53441741
53467528
+
AD000090.1
chr19
35557956
35581954
+
AL022311.1
chr22
37876148
37895563
+
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:820
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA