exRNAdisease

General Information

Database ID:

exR0206898

RNA Name:

SNHG5

RNA Type:

lncRNA

Chromosome:

chr6

Starnd:

Coordinate:

Start Site(bp):

85650491

End Site(bp):

85678932

External Links:

Disease Information

Disease Name:	Subarachnoid Hemorrhage
Disease Category:	Nervous System Diseases
MeSH ID:	D013345
Type:	Diseases Category/Nervous System Diseases
Alias:	SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial

Expression Detail

GEO ID:	GSE121868
Description:	Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:	Disease Sample Source
Case Disease Type:	Subarachnoid Hemorrhage
Case Disease SubType:	NA
Case Sample:	Subarachnoid Hemorrhage
Control Sample:	Blood Plasma
Number of Case:	257
Number of Control:	266
Number of Samples:	523

Regulatory Relationship

mRNA targets:

Gene Symbol	Chromosome	Start Site(bp)	End Site(bp)	Strand
ACTB	chr7	5527148	5563784	-
AK1	chr9	127866486	127877675	-
AK2	chr1	33007940	33080996	-
ALDOA	chr16	30064164	30070457	+
AD000671.2	chr19	35739252	35745432	-
AHSA1	chr14	77457870	77469472	+
AKIRIN1	chr1	38991276	39006059	+

miRNA targets:

miRNA Symbol	Chromosome	Start Site(bp)	End Site(bp)	Strand
hsa-miR-552-5p	chr1	34669650	34669670	-
hsa-miR-32-5p	chr9	109046272	109046293	-
hsa-miR-181a-5p	chr1	198859108	198859130	-
hsa-miR-369-3p	chr14	101065641	101065661	+
hsa-miR-130a-5p	chr11	57641212	57641233	+
hsa-miR-216a-5p	chr2	55989020	55989041	-
hsa-miR-25-3p	chr7	100093571	100093592	-
hsa-miR-5590-3p	chr2	134857853	134857873	+
hsa-miR-1197	chr14	101025620	101025640	+
hsa-miR-4465	chr6	140683855	140683876	+
hsa-miR-655-3p	chr14	101049610	101049631	+
hsa-miR-2355-3p	chr2	207109999	207110020	-
hsa-miR-323a-3p	chr14	101025782	101025802	+
hsa-miR-142-5p	chr17	58331283	58331303	-
hsa-miR-421	chrX	74218392	74218414	-
hsa-miR-181d-5p	chr19	13874910	13874932	+
hsa-miR-132-3p	chr17	2049929	2049950	-
hsa-miR-92b-3p	chr1	155195237	155195258	+
hsa-miR-26b-5p	chr2	218402657	218402677	+
hsa-miR-363-3p	chrX	134169382	134169403	-
hsa-miR-155-5p	chr21	25573983	25574006	+
hsa-miR-23c	chrX	20017101	20017122	-
hsa-miR-23a-3p	chr19	13836595	13836615	-
hsa-miR-26a-5p	chr3	37969413	37969434	+
hsa-miR-6509-3p	chr7	135207006	135207027	-
hsa-miR-1297	chr13	54311981	54311997	-
hsa-miR-377-3p	chr14	101062094	101062115	+
hsa-miR-23b-3p	chr9	95085265	95085287	+
hsa-miR-374c-5p	chrX	74218561	74218582	+
hsa-miR-4262	chr2	11836943	11836959	-

circRNA targets:

lncRNA targets:

Display:

Experiment Detail

GEO ID:	GSE121868
Sample Source:	Blood
Source Fraction:	Plasma
Platform:	GPL11154
Method:	NGS
Num of detected RNA Type:	5
Num of detected RNAs of this Type:	820
Sample treatment protocol:	NA
RNA Extract protocol:	total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:	TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.

Reference