exRNAdisease

General Information

Database ID:

exR0206900

RNA Name:

SNHG8

RNA Type:

lncRNA

Chromosome:

chr4

Starnd:

Coordinate:

Start Site(bp):

118278709

End Site(bp):

118285316

External Links:

Disease Information

Disease Name:	Subarachnoid Hemorrhage
Disease Category:	Nervous System Diseases
MeSH ID:	D013345
Type:	Diseases Category/Nervous System Diseases
Alias:	SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial

Expression Detail

GEO ID:	GSE121868
Description:	Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:	Disease Sample Source
Case Disease Type:	Subarachnoid Hemorrhage
Case Disease SubType:	NA
Case Sample:	Subarachnoid Hemorrhage
Control Sample:	Blood Plasma
Number of Case:	257
Number of Control:	266
Number of Samples:	523

Regulatory Relationship

mRNA targets:

Gene Symbol	Chromosome	Start Site(bp)	End Site(bp)	Strand
AC048338.1	chr12	122207779	122266423	-
ACTB	chr7	5527148	5563784	-
ACTG1	chr17	81509971	81523847	-
AFG1L	chr6	108294991	108526796	+
ALDOA	chr16	30064164	30070457	+
AC024592.3	chr19	5866171	5903787	-

miRNA targets:

miRNA Symbol	Chromosome	Start Site(bp)	End Site(bp)	Strand
hsa-miR-149-5p	chr2	240456015	240456037	+
hsa-miR-154-5p	chr14	101059769	101059790	+
hsa-miR-384	chrX	76919285	76919304	-
hsa-miR-494-3p	chr14	101029681	101029702	+
hsa-miR-522-3p	chr19	53751264	53751285	+
hsa-miR-588	chr6	126484646	126484666	+
hsa-miR-620	chr12	116148575	116148594	-
hsa-miR-411-5p	chr14	101023340	101023360	+
hsa-miR-656-3p	chr14	101066766	101066786	+
hsa-miR-542-3p	chrX	134541364	134541385	-
hsa-miR-425-5p	chr3	49020199	49020221	-
hsa-miR-371a-5p	chr19	53787680	53787699	+
hsa-miR-1270	chr19	20399320	20399342	-
hsa-miR-224-3p	chrX	151958584	151958606	-
hsa-miR-4701-5p	chr12	48772014	48772035	-
hsa-miR-506-5p	chrX	147230788	147230809	-
hsa-miR-873-3p	chr9	28888889	28888910	-
hsa-miR-7151-5p	chr10	67403388	67403410	-

circRNA targets:

lncRNA targets:

lncRNA Symbol	Chromosome	Start Site(bp)	End Site(bp)	Strand
AC007952.4	chr17	19112000	19112636	-
AC068205.2	chr11	43578889	43840030	+
AC139149.1	chr17	81514047	81527776	+
AL133215.2	chr10	101060029	101061005	-

Display:

Experiment Detail

GEO ID:	GSE121868
Sample Source:	Blood
Source Fraction:	Plasma
Platform:	GPL11154
Method:	NGS
Num of detected RNA Type:	5
Num of detected RNAs of this Type:	820
Sample treatment protocol:	NA
RNA Extract protocol:	total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:	TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.

Reference