Entry Detail



General Information

Database ID:exR0208771
RNA Name:AATF
RNA Type:mRNA
Chromosome:chr17
Starnd:+
Coordinate:
Start Site(bp):36948954End Site(bp):37056871
External Links:ENSG00000275700



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
SSR1
chr6
7268306
7347446
-
RPS19
chr19
41860255
41872925
+
THY1
chr11
119417378
119424985
-
EIF3B
chr7
2354086
2380745
+
CD74
chr5
150400041
150412929
-
CASP2
chr7
143288215
143307696
+
BDH1
chr3
197509783
197573323
-
RNF113A
chrX
119870475
119871733
-
RTCA
chr1
100266207
100292769
+
AP002990.1
chr11
62559603
62591531
-
CKB
chr14
103519667
103522833
-
CLDN23
chr8
8701937
8704096
+
RPL8
chr8
144789765
144792587
-
VLDLR
chr9
2621787
2660056
+
ACTB
chr7
5527148
5563784
-
MT-CO3
chrMT
9207
9990
+
RPS6
chr9
19375715
19380236
-
NIPA2
chr15
22838641
22868384
+
UBA52
chr19
18571730
18577550
+
DYNC1H1
chr14
101964573
102056443
+
UBALD2
chr17
76265348
76271298
+
LSM1
chr8
38163335
38176730
-
CIC
chr19
42268537
42295797
+
PAQR3
chr4
78887127
78939438
-
CCNA2
chr4
121816444
121823933
-
TMEM258
chr11
61768501
61792802
-
ACTR1B
chr2
97655939
97664044
-
CIT
chr12
119685791
119877320
-
FAN1
chr15
30890559
30943108
+
SRGN
chr10
69088103
69104805
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-4492
chr11
118910765
118910781
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AL355987.4
chr9
136799223
136810042
+
NAALADL2-AS2
chr3
175234861
175271096
-
SNHG1
chr11
62851984
62855953
-
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA