Entry Detail



General Information

Database ID:exR0208774
RNA Name:ABCA1
RNA Type:mRNA
Chromosome:chr9
Starnd:-
Coordinate:
Start Site(bp):104781006End Site(bp):104928155
External Links:ENSG00000165029



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
COX5B
chr2
97646062
97648383
+
EIF3L
chr22
37848868
37889407
+
EWSR1
chr22
29268009
29300525
+
FEN1
chr11
61792911
61797238
+
GANAB
chr11
62624826
62646726
-
GAPDH
chr12
6534512
6538374
+
HADH
chr4
107989714
108035175
+
IGF2
chr11
2129112
2141238
-
IGF2BP3
chr7
23310209
23470491
-
KDM3B
chr5
138352685
138437028
+
LSMEM1
chr7
112480853
112491062
+
LUC7L3
chr17
50719565
50756219
+
MPI
chr15
74890005
74902219
+
NISCH
chr3
52455118
52493068
+
PIANP
chr12
6693792
6700800
-
PPRC1
chr10
102132994
102150333
+
RPL13A
chr19
49487554
49492308
+
RPL14
chr3
40457292
40468587
+
RPL19
chr17
39200283
39204732
+
RPS23
chr5
82273320
82278396
-
SEC11A
chr15
84669538
84716460
-
SHROOM3
chr4
76435229
76783253
+
SND1
chr7
127652194
128092609
+
UBE2R2
chr9
33817160
33920399
+
ZNF217
chr20
53567065
53609907
-
ZNF568
chr19
36916329
36998700
+
ZNF696
chr8
143289676
143299952
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-1294
chr5
154347153
154347174
+
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA