Entry Detail



General Information

Database ID:exR0208778
RNA Name:ABCA2
RNA Type:mRNA
Chromosome:chr9
Starnd:-
Coordinate:
Start Site(bp):137007234End Site(bp):137028922
External Links:ENSG00000107331



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
STK11
chr19
1177558
1228431
+
SLC36A4
chr11
93144174
93197991
-
KBTBD11
chr8
1973677
2006936
+
BMP2K
chr4
78776342
78916372
+
EXOC7
chr17
76081016
76121576
-
SMG5
chr1
156249224
156282825
-
SPECC1L
chr22
24270817
24417739
+
XXYLT1
chr3
195068284
195271159
-
NIP7
chr16
69337996
69343106
+
MYL5
chr4
673580
682033
+
RBPJ
chr4
26163455
26435131
+
REEP5
chr5
112876385
112922289
-
GANAB
chr11
62624826
62646726
-
DDX6
chr11
118747763
118791164
-
METTL26
chr16
634427
636366
-
ACAP3
chr1
1292390
1309609
-
LRP5
chr11
68312591
68449275
+
SUPT5H
chr19
39436156
39476670
+
MCM2
chr3
127598410
127622436
+
HNRNPK
chr9
83968083
83980616
-
FLNA
chrX
154348524
154374638
-
SRRM2
chr16
2752626
2772538
+
POMGNT1
chr1
46188682
46220305
-
PLXNA1
chr3
126988594
127037392
+
HDGFL3
chr15
83112738
83207823
-
YWHAQ
chr2
9583967
9630997
-
LMAN2
chr5
177331567
177351668
-
HECA
chr6
139135080
139180802
+
SEC24C
chr10
73744372
73772161
+
EXTL3
chr8
28600469
28755599
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-1286
chr22
20249145
20249165
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC016876.2
chr17
7581964
7584086
-
AC067930.1
chr8
143579636
143580670
+
AD000090.1
chr19
35557956
35581954
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA