Entry Detail



General Information

Database ID:exR0208789
RNA Name:ABCB4
RNA Type:mRNA
Chromosome:chr7
Starnd:-
Coordinate:
Start Site(bp):87401697End Site(bp):87480435
External Links:ENSG00000005471



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCB1
chr7
87503017
87713323
-
AP1G2
chr14
23559565
23568070
-
BASP1
chr5
17065598
17276843
+
CENPV
chr17
16342534
16353656
-
CLDN6
chr16
3014712
3020071
-
CUL5
chr11
108008898
108107761
+
DDX5
chr17
64498254
64508199
-
EIF5A
chr17
7306999
7312463
+
FXR2
chr17
7591230
7614897
-
HNRNPDL
chr4
82422564
82430408
-
HSPA8
chr11
123057489
123063230
-
HTATSF1
chrX
136497079
136512346
+
KIF5B
chr10
32009015
32056425
-
MAF1
chr8
144104461
144107611
+
NUAK1
chr12
106063340
106140033
-
PAM
chr5
102753981
103031105
+
PHF14
chr7
10973336
11169630
+
RPL5
chr1
92832013
92841924
+
SERF2
chr15
43777087
43802589
+
SLC39A1
chr1
153959099
153968184
-
SNX18
chr5
54517759
54546586
+
SPOCK2
chr10
72059034
72089032
-
STX7
chr6
132445867
132513198
-
TMEM167A
chr5
83052846
83077863
-
TPT1
chr13
45333471
45341370
-
ZNF136
chr19
12163064
12189871
+
ZNF385A
chr12
54369133
54391298
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA