Entry Detail



General Information

Database ID:exR0208791
RNA Name:ABCB6
RNA Type:mRNA
Chromosome:chr2
Starnd:-
Coordinate:
Start Site(bp):219209772End Site(bp):219218994
External Links:ENSG00000115657



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
CLCN5
chrX
49922596
50099235
+
CHMP1A
chr16
89644435
89657721
-
COA1
chr7
43608456
43729717
-
PA2G4
chr12
56104537
56113910
+
PYCR2
chr1
225919877
225924340
-
HLA-E
chr6
30489509
30494194
+
SNRPD2
chr19
45687454
45692569
-
GADD45GIP1
chr19
12953119
12957223
-
VCL
chr10
73995193
74121363
+
SNRPD3
chr22
24555958
24582052
+
FARSA
chr19
12922479
12934037
-
SMDT1
chr22
42079691
42084284
+
EEF2
chr19
3976056
3985463
-
POU3F3
chr2
104853287
104858574
+
GRK2
chr11
67266473
67286556
+
GAPDH
chr12
6534512
6538374
+
WSB1
chr17
27294076
27315926
+
MYCBP2
chr13
77044657
77327094
-
SAC3D1
chr11
65040901
65044828
+
PPP4C
chr16
30075978
30085376
+
KRT7
chr12
52232520
52252186
+
AC068946.2
chr2
219209772
219222738
-
PTPRS
chr19
5158495
5340803
-
SETD1B
chr12
121804180
121832584
+
ARID1B
chr6
156776020
157210779
+
CAMK2G
chr10
73812501
73874591
-
POU6F1
chr12
51186936
51217708
-
PFN1
chr17
4945652
4949061
-
LAMP1
chr13
113297239
113323672
+
RAD51D
chr17
35092208
35121522
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA