Entry Detail



General Information

Database ID:exR0208808
RNA Name:ABCD3
RNA Type:mRNA
Chromosome:chr1
Starnd:+
Coordinate:
Start Site(bp):94418389End Site(bp):94518666
External Links:ENSG00000117528



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
SLC25A6
chrX
1386152
1392113
-
RPL13
chr16
89560657
89566828
+
ACYP2
chr2
53970838
54305300
+
RPL15
chr3
23916545
23924374
+
C18orf25
chr18
46173553
46266992
+
GFM1
chr3
158644278
158692575
+
SH3KBP1
chrX
19533977
19887600
-
EGLN2
chr19
40798996
40808434
+
MIF
chr22
23894383
23895227
+
LTA4H
chr12
96000753
96043520
-
RIC1
chr9
5629025
5776557
+
EIF3L
chr22
37848868
37889407
+
SMIM13
chr6
11093834
11138733
+
ZKSCAN8
chr6
28141883
28159460
+
NACA
chr12
56712427
56731628
-
CBX4
chr17
79833156
79839440
-
RPS6
chr9
19375715
19380236
-
HNRNPR
chr1
23303771
23344336
-
RPL28
chr19
55385345
55403250
+
MYCN
chr2
15940550
15947007
+
PELP1
chr17
4669774
4704337
-
HSP90AA1
chr14
102080738
102139699
-
GMPS
chr3
155870650
155944020
+
COPA
chr1
160288594
160343273
-
PLEKHO2
chr15
64841883
64868002
+
MAP2K4
chr17
12020829
12143830
+
LAPTM4B
chr8
97775057
97853013
+
RBX1
chr22
40951347
40973309
+
C11orf24
chr11
68261338
68272001
-
CRYL1
chr13
20403666
20525873
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AL022311.1
chr22
37876148
37895563
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA