Entry Detail



General Information

Database ID:exR0208811
RNA Name:ABCF1
RNA Type:mRNA
Chromosome:chr6
Starnd:+
Coordinate:
Start Site(bp):30571393End Site(bp):30597179
External Links:ENSG00000204574



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
HLA-DRB1
chr6
32578769
32589848
-
ZNF501
chr3
44729596
44737083
+
TMEM250
chr9
136114581
136118875
-
MT-CO1
chrMT
5904
7445
+
GLUL
chr1
182381704
182392206
-
CIC
chr19
42268537
42295797
+
MTRNR2L8
chr11
10507894
10509186
-
MYLIP
chr6
16129086
16148248
+
IFIT3
chr10
89327997
89340971
+
ZNF581
chr19
55635459
55645623
+
MAU2
chr19
19320829
19358754
+
CERS2
chr1
150960583
150975004
-
TNRC6A
chr16
24610209
24827632
+
PDP2
chr16
66878589
66895754
+
BSG
chr19
571277
583493
+
EEF1G
chr11
62559596
62574086
-
PTBP1
chr19
797075
812327
+
AP1S2
chrX
15825806
15854931
-
FTL
chr19
48965309
48966879
+
IQGAP1
chr15
90388242
90502239
+
SURF4
chr9
133361450
133376166
-
SELENON
chr1
25800176
25818221
+
RPS6
chr9
19375715
19380236
-
PDCD6IP
chr3
33798571
33869707
+
GPC6
chr13
93226807
94408020
+
VPS26A
chr10
69123512
69174412
+
CYFIP2
chr5
157266079
157395595
+
MFSD5
chr12
53251251
53254405
+
AC005832.4
chr12
4604944
4662643
+
BZW2
chr7
16646131
16706523
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-302c-3p
chr4
112648366
112648388
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC000068.1
chr22
19447893
19450105
+
AC010642.2
chr19
58309727
58327248
-
DANCR
chr4
52712404
52720351
+
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA