Entry Detail



General Information

Database ID:exR0208815
RNA Name:ABCG2
RNA Type:mRNA
Chromosome:chr4
Starnd:-
Coordinate:
Start Site(bp):88090150End Site(bp):88231628
External Links:ENSG00000118777



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
PTMS
chr12
6765516
6770952
+
AP2B1
chr17
35578046
35726413
+
PFN1
chr17
4945652
4949061
-
ACKR3
chr2
236567787
236582354
+
RFX5
chr1
151340640
151347357
-
SUPT16H
chr14
21351476
21384019
-
ABHD14A-ACY1
chr3
51974706
51989183
+
PLXNA2
chr1
208022242
208244384
-
PDXDC1
chr16
14974591
15139339
+
SDC2
chr8
96493813
96611790
+
MORN3
chr12
121648742
121672631
-
RARB
chr3
25174332
25597932
+
GNPDA1
chr5
141991749
142013041
-
TPT1
chr13
45333471
45341370
-
ZNRF2
chr7
30284597
30367689
+
PSMA5
chr1
109399042
109426448
-
ELF1
chr13
40931924
41061440
-
PDHB
chr3
58427630
58433857
-
PSMA4
chr15
78540405
78552417
+
CCND3
chr6
41934933
42050357
-
NELFA
chr4
1982717
2041903
-
RPS3
chr11
75399515
75422280
+
MTRNR2L12
chr3
96617188
96618236
-
NMD3
chr3
161104696
161253532
+
UGT3A2
chr5
36035021
36071358
-
AFF4
chr5
132875395
132963634
-
HNRNPA2B1
chr7
26173057
26201529
-
CDH1
chr16
68737292
68835541
+
SIPA1L1
chr14
71320449
71741229
+
RPL9
chr4
39452521
39458949
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC078881.1
chr4
177442519
177681381
+
AC069287.1
chr11
112967
125927
-
NR2F1-AS1
chr5
93360779
93585649
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA