Entry Detail



General Information

Database ID:exR0208855
RNA Name:AC006486.1
RNA Type:mRNA
Chromosome:chr19
Starnd:-
Coordinate:
Start Site(bp):42234583End Site(bp):42255132
External Links:ENSG00000268643



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
PIGS
chr17
28553383
28571794
-
FGFR4
chr5
177086905
177098144
+
SPG7
chr16
89490719
89557768
+
TXLNA
chr1
32179675
32198285
+
ZZEF1
chr17
4004445
4143030
-
HNRNPC
chr14
21209136
21269494
-
CALM3
chr19
46601074
46610782
+
LRIG2
chr1
113073198
113132260
+
ROCK2
chr2
11179759
11348330
-
KIF1A
chr2
240713761
240821036
-
HERC1
chr15
63608618
63833948
-
GSK3B
chr3
119821323
120094417
-
SIT1
chr9
35649295
35650950
-
GSK3A
chr19
42230190
42242625
-
RIMBP3
chr22
18605815
18611919
-
FAM89B
chr11
65572349
65574198
+
SMTNL2
chr17
4583999
4608319
+
FJX1
chr11
35618460
35620865
+
COL6A1
chr21
45981769
46005050
+
DGKQ
chr4
958887
986895
-
SAE1
chr19
47113274
47210636
+
CNP
chr17
41966763
41977740
+
RAB24
chr5
177301198
177303744
-
MYBBP1A
chr17
4538897
4555631
-
MIA3
chr1
222618097
222668007
+
NDFIP1
chr5
142108779
142154440
+
IDH3G
chrX
153785766
153794523
-
GLYR1
chr16
4803203
4847288
-
ERF
chr19
42247569
42255128
-
NIPSNAP1
chr22
29554808
29581327
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC020663.1
chr16
4730115
4752565
-
GUSBP11
chr22
23638487
23717356
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA