Entry Detail



General Information

Database ID:exR0208874
RNA Name:ACAP1
RNA Type:mRNA
Chromosome:chr17
Starnd:+
Coordinate:
Start Site(bp):7336529End Site(bp):7351477
External Links:ENSG00000072818



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
HLA-DRA
chr6
32439878
32445046
+
FOXH1
chr8
144473412
144475849
-
ZNF449
chrX
135344796
135363413
+
MIF
chr22
23894383
23895227
+
KDF1
chr1
26949562
26960468
-
SQSTM1
chr5
179806398
179838078
+
PFN1
chr17
4945652
4949061
-
CD74
chr5
150400041
150412929
-
RGS10
chr10
119499817
119542719
-
TUBB
chr6
30720352
30725426
+
ISG15
chr1
1001138
1014540
+
C20orf204
chr20
64034344
64039962
+
AL133352.1
chr10
100505628
100529881
-
DHX16
chr6
30653119
30673006
-
AP002990.1
chr11
62559603
62591531
-
UGCG
chr9
111896814
111935369
+
DNAJC30
chr7
73680918
73683453
-
ACTG1
chr17
81509971
81523847
-
VPS53
chr17
508668
721717
-
HLA-DMA
chr6
32948613
32969094
-
CDC25B
chr20
3786772
3806121
+
RCC1
chr1
28505943
28539300
+
YME1L1
chr10
27110112
27155266
-
REEP3
chr10
63521401
63625128
+
CD70
chr19
6583183
6604103
-
ZNF593
chr1
26169908
26170873
+
NSMF
chr9
137447573
137459334
-
EXOC3
chr5
443175
471937
+
ZNF761
chr19
53445001
53458261
+
APH1A
chr1
150265399
150269580
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC139149.1
chr17
81514047
81527776
+
LINC01184
chr5
127939152
128083172
-
SNHG3
chr1
28505980
28510892
+
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA